FJDorfner commited on
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cdcfbda
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1 Parent(s): 767f684

Update app.py

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Files changed (1) hide show
  1. app.py +6 -1
app.py CHANGED
@@ -64,14 +64,19 @@ def predict_image(input_image, input_file):
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  image_mask = Model_Seg.load_and_segment_image(image_path, device)
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  overlay_image_np, original_image_np = utils.overlay_mask(image_path, image_mask)
 
 
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  image_mask_im = sitk.GetImageFromArray(image_mask[None, :, :].astype(uint8))
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  image_im = sitk.GetImageFromArray(original_image_np[None, :, :].astype(uint8))
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  cropped_boxed_im, _ = utils.mask_and_crop(image_im, image_mask_im)
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  cropped_boxed_array = sitk.GetArrayFromImage(cropped_boxed_im)
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- cropped_boxed_array_disp = cropped_boxed_array.squeeze()
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  cropped_boxed_tensor = torch.Tensor(cropped_boxed_array)
 
 
 
 
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  prediction, image_transformed = Model_Class.load_and_classify_image(cropped_boxed_tensor, device)
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  image_mask = Model_Seg.load_and_segment_image(image_path, device)
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  overlay_image_np, original_image_np = utils.overlay_mask(image_path, image_mask)
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+ overlay_image_np = rot90(overlay_image_np, k=3)
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+ overlay_image_np = fliplr(overlay_image_np)
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  image_mask_im = sitk.GetImageFromArray(image_mask[None, :, :].astype(uint8))
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  image_im = sitk.GetImageFromArray(original_image_np[None, :, :].astype(uint8))
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  cropped_boxed_im, _ = utils.mask_and_crop(image_im, image_mask_im)
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  cropped_boxed_array = sitk.GetArrayFromImage(cropped_boxed_im)
 
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  cropped_boxed_tensor = torch.Tensor(cropped_boxed_array)
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+ rotate = Rotate90(spatial_axes=(0, 1), k=3)
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+
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+ cropped_boxed_tensor = rotate(cropped_boxed_tensor)
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+ cropped_boxed_array_disp = cropped_boxed_tensor.numpy().squeeze().astype(uint8)
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  prediction, image_transformed = Model_Class.load_and_classify_image(cropped_boxed_tensor, device)
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