# Hacky fix for FAISS error on macOS # See https://stackoverflow.com/a/63374568/4545692 import os import os.path import torch from datasets import load_dataset from transformers import (DPRContextEncoder, DPRContextEncoderTokenizer, DPRQuestionEncoder, DPRQuestionEncoderTokenizer) from src.evaluation import exact_match, f1 os.environ["KMP_DUPLICATE_LIB_OK"] = "True" class FAISRetriever: """A class used to retrieve relevant documents based on some query. based on https://huggingface.co/docs/datasets/faiss_es#faiss. """ def __init__(self, dataset_name: str = "GroNLP/ik-nlp-22_slp") -> None: """Initialize the retriever Args: dataset (str, optional): The dataset to train on. Assumes the information is stored in a column named 'text'. Defaults to "GroNLP/ik-nlp-22_slp". """ torch.set_grad_enabled(False) # Context encoding and tokenization self.ctx_encoder = DPRContextEncoder.from_pretrained( "facebook/dpr-ctx_encoder-single-nq-base" ) self.ctx_tokenizer = DPRContextEncoderTokenizer.from_pretrained( "facebook/dpr-ctx_encoder-single-nq-base" ) # Question encoding and tokenization self.q_encoder = DPRQuestionEncoder.from_pretrained( "facebook/dpr-question_encoder-single-nq-base" ) self.q_tokenizer = DPRQuestionEncoderTokenizer.from_pretrained( "facebook/dpr-question_encoder-single-nq-base" ) # Dataset building self.dataset_name = dataset_name self.dataset = self._init_dataset(dataset_name) def _init_dataset(self, dataset_name: str, embedding_path: str = "./models/paragraphs_embedding.faiss"): """Loads the dataset and adds FAISS embeddings. Args: dataset (str): A HuggingFace dataset name. fname (str): The name to use to save the embeddings to disk for faster loading after the first run. Returns: Dataset: A dataset with a new column 'embeddings' containing FAISS embeddings. """ # Load dataset ds = load_dataset(dataset_name, name="paragraphs")[ "train"] # type: ignore print(ds) if os.path.exists(embedding_path): # If we already have FAISS embeddings, load them from disk ds.load_faiss_index('embeddings', embedding_path) # type: ignore return ds else: # If there are no FAISS embeddings, generate them def embed(row): # Inline helper function to perform embedding p = row["text"] tok = self.ctx_tokenizer( p, return_tensors="pt", truncation=True) enc = self.ctx_encoder(**tok)[0][0].numpy() return {"embeddings": enc} # Add FAISS embeddings ds_with_embeddings = ds.map(embed) # type: ignore ds_with_embeddings.add_faiss_index(column="embeddings") # save dataset w/ embeddings os.makedirs("./models/", exist_ok=True) ds_with_embeddings.save_faiss_index("embeddings", embedding_path) return ds_with_embeddings def retrieve(self, query: str, k: int = 5): """Retrieve the top k matches for a search query. Args: query (str): A search query k (int, optional): The number of documents to retrieve. Defaults to 5. Returns: tuple: A tuple of lists of scores and results. """ def embed(q): # Inline helper function to perform embedding tok = self.q_tokenizer(q, return_tensors="pt", truncation=True) return self.q_encoder(**tok)[0][0].numpy() question_embedding = embed(query) scores, results = self.dataset.get_nearest_examples( "embeddings", question_embedding, k=k ) return scores, results def evaluate(self): """Evaluates the entire model by computing F1-score and exact match on the entire dataset. Returns: float: overall exact match float: overall F1-score """ questions_ds = load_dataset( self.dataset_name, name="questions")['test'] questions = questions_ds['question'] answers = questions_ds['answer'] predictions = [] scores = 0 # Currently just takes the first answer and does not look at scores yet for question in questions: score, result = self.retrieve(question, 1) scores += score[0] predictions.append(result['text'][0]) exact_matches = [exact_match( predictions[i], answers[i]) for i in range(len(answers))] f1_scores = [f1( predictions[i], answers[i]) for i in range(len(answers))] return sum(exact_matches) / len(exact_matches), sum(f1_scores) / len(f1_scores)