fix: cleaning and resets together
Browse files- app/circumstances/circumstances_dropdowns.py +0 -1
- app/mode_advanced.py +3 -5
- app/mode_simple.py +3 -8
- app/physical/physical_checkbox.py +0 -30
- app/validation_submission/resets.py +46 -0
- app/validation_submission/utils_individual.py +1 -4
- app/validation_submission/validation.py +3 -17
- test.py +0 -10
app/circumstances/circumstances_dropdowns.py
CHANGED
@@ -135,7 +135,6 @@ def on_select_dropdown_extra_level2(evt: gr.SelectData, individual):
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def on_change_openfield_level2(openfield_level2_dead, individual):
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-
# print("Saving open field")
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individual = add_data_to_individual(
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"circumstance_open_field", str(openfield_level2_dead).lower(), individual
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)
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def on_change_openfield_level2(openfield_level2_dead, individual):
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individual = add_data_to_individual(
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"circumstance_open_field", str(openfield_level2_dead).lower(), individual
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)
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app/mode_advanced.py
CHANGED
@@ -9,17 +9,15 @@ from dead_wounded.wounded import show_section_wounded
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from circumstances.circumstances import show_circumstances
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from circumstances.circumstances_dropdowns import *
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from physical.physical_select_animal import show_physical, find_bounding_box
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-
from physical.physical_checkbox import on_select_body_part
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from behavior.behavior_checkbox import show_behavior, on_select_behavior
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from follow_up.followup_events import save_fe
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from styling.style import *
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from validation_submission.utils_individual import generate_random_md5
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from validation_submission.utils_individual import add_data_to_individual
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from validation_submission.submission import validate_save_individual
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-
from validation_submission.validation import reset_error_box
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-
from validation_submission.utils_individual import reset_individual
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from validation_submission.utils_save import save_details, save_image
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-
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from dotenv import load_dotenv
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import os
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@@ -129,7 +127,7 @@ with gr.Blocks(theme='shivi/calm_seafoam') as advanced:
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location_data = gr.JSON(label="Identified GPS Location", visible=False)
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hidden_input = gr.Textbox(visible=False, elem_id="textbox_id")
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locationtext = gr.Textbox(visible=False, elem_id="textbox_id")
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-
btn_gpslocation = gr.Button("Get Coordinates using GPS (Permission required)")
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btn_gpslocation.click(None, [], [], js=js_geocode)
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hidden_input.change(display_location,
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inputs=[hidden_input, individual],
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from circumstances.circumstances import show_circumstances
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from circumstances.circumstances_dropdowns import *
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from physical.physical_select_animal import show_physical, find_bounding_box
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+
from physical.physical_checkbox import on_select_body_part
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from behavior.behavior_checkbox import show_behavior, on_select_behavior
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from follow_up.followup_events import save_fe
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from styling.style import *
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from validation_submission.utils_individual import generate_random_md5
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from validation_submission.utils_individual import add_data_to_individual
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from validation_submission.submission import validate_save_individual
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from validation_submission.utils_save import save_details, save_image
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+
from validation_submission.resets import reset_individual, reset_error_box, hide_physical
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from dotenv import load_dotenv
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import os
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location_data = gr.JSON(label="Identified GPS Location", visible=False)
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hidden_input = gr.Textbox(visible=False, elem_id="textbox_id")
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locationtext = gr.Textbox(visible=False, elem_id="textbox_id")
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+
btn_gpslocation = gr.Button("Get Coordinates using GPS (Permission required - May take a few seconds)")
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btn_gpslocation.click(None, [], [], js=js_geocode)
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hidden_input.change(display_location,
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inputs=[hidden_input, individual],
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app/mode_simple.py
CHANGED
@@ -8,16 +8,13 @@ from dead_wounded.wounded import show_section_wounded
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from circumstances.circumstances import show_circumstances
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from circumstances.circumstances_dropdowns import *
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from physical.physical_select_animal import show_physical, find_bounding_box
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-
from physical.physical_checkbox import on_select_body_part
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from behavior.behavior_checkbox import show_behavior, on_select_behavior
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from follow_up.followup_events import save_fe
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from styling.style import *
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-
from validation_submission.utils_individual import reset_individual
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-
from validation_submission.utils_individual import add_data_to_individual
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from validation_submission.submission import validate_save_individual
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-
from validation_submission.validation import reset_error_box
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-
from validation_submission.utils_individual import generate_random_md5
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from validation_submission.utils_save import save_details, save_image
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from dotenv import load_dotenv
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import os
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@@ -29,8 +26,6 @@ PATH_ICONS = PATH + PATH_ASSETS + "icons/"
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with gr.Blocks(theme='shivi/calm_seafoam') as simple:
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mode = "simple"
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individual = gr.State({})
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-
individual.value = add_data_to_individual("image_md5", generate_random_md5(), individual.value)
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-
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# ---------------------------------------------------------
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# Header Text
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with gr.Row():
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@@ -106,7 +101,7 @@ with gr.Blocks(theme='shivi/calm_seafoam') as simple:
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location_data = gr.JSON(label="Identified GPS Location", visible=False)
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hidden_input = gr.Textbox(visible=False, elem_id="textbox_id")
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locationtext = gr.Textbox(visible=False, elem_id="textbox_id")
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-
btn_gpslocation = gr.Button("Get Coordinates using GPS (Permission required)")
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btn_gpslocation.click(None, [], [], js=js_geocode)
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hidden_input.change(display_location,
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inputs=[hidden_input, individual],
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from circumstances.circumstances import show_circumstances
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from circumstances.circumstances_dropdowns import *
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from physical.physical_select_animal import show_physical, find_bounding_box
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+
from physical.physical_checkbox import on_select_body_part
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from behavior.behavior_checkbox import show_behavior, on_select_behavior
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from follow_up.followup_events import save_fe
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from styling.style import *
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from validation_submission.submission import validate_save_individual
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from validation_submission.utils_save import save_details, save_image
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+
from validation_submission.resets import reset_individual, reset_error_box, hide_physical
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from dotenv import load_dotenv
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import os
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with gr.Blocks(theme='shivi/calm_seafoam') as simple:
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mode = "simple"
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individual = gr.State({})
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# ---------------------------------------------------------
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# Header Text
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with gr.Row():
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location_data = gr.JSON(label="Identified GPS Location", visible=False)
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hidden_input = gr.Textbox(visible=False, elem_id="textbox_id")
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locationtext = gr.Textbox(visible=False, elem_id="textbox_id")
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+
btn_gpslocation = gr.Button("Get Coordinates using GPS (Permission required - May take a few seconds)")
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btn_gpslocation.click(None, [], [], js=js_geocode)
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hidden_input.change(display_location,
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inputs=[hidden_input, individual],
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app/physical/physical_checkbox.py
CHANGED
@@ -17,7 +17,6 @@ def retrieve_config_options(label, dropdown_config):
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def get_options_description(value, mode):
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-
# print(f"Get options description: {mode}")
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if mode == "simple":
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dropdown_config = get_custom_config_dropdowns(
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"config_checkbox_physical_simple.json"
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@@ -132,32 +131,3 @@ def on_select_body_part(body_part_checkbox, body_part, individual):
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)
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return individual
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-
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-
# ---------------------------------------------------------
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-
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-
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-
def hide_physical(mode):
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-
(
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checkbox_beak,
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text_beak,
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-
checkbox_body,
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-
text_body,
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-
checkbox_feathers,
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text_feathers,
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-
checkbox_head,
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-
text_head,
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-
checkbox_legs,
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text_legs,
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-
) = process_body_parts("wounded", mode, "None")
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-
return (
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checkbox_beak,
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text_beak,
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-
checkbox_body,
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-
text_body,
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-
checkbox_feathers,
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-
text_feathers,
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-
checkbox_head,
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-
text_head,
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-
checkbox_legs,
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-
text_legs,
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-
)
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def get_options_description(value, mode):
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if mode == "simple":
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dropdown_config = get_custom_config_dropdowns(
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"config_checkbox_physical_simple.json"
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)
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return individual
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app/validation_submission/resets.py
ADDED
@@ -0,0 +1,46 @@
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+
import gradio as gr
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+
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+
from physical.physical_checkbox import process_body_parts
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+
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+
from dotenv import load_dotenv
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+
import os
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+
load_dotenv()
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+
PATH = os.getcwd() + "/"
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+
PATH_ASSETS = os.getenv('PATH_ASSETS')
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+
PATH_ICONS = PATH + PATH_ASSETS + "icons/"
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+
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+
def reset_individual(individual):
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+
individual = {}
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+
return individual
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+
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+
def reset_error_box(error_icon, error_box):
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+
error_icon = gr.Image(PATH_ICONS+"supprimer.png", height=80, width=80, visible=False)
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+
error_box = gr.Text(value=None, visible=False)
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+
return error_icon, error_box
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+
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+
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+
def hide_physical(mode):
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+
(
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+
checkbox_beak,
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+
text_beak,
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+
checkbox_body,
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+
text_body,
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+
checkbox_feathers,
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+
text_feathers,
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+
checkbox_head,
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+
text_head,
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+
checkbox_legs,
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+
text_legs,
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+
) = process_body_parts("wounded", mode, "None")
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+
return (
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+
checkbox_beak,
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+
text_beak,
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+
checkbox_body,
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+
text_body,
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+
checkbox_feathers,
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+
text_feathers,
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+
checkbox_head,
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+
text_head,
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+
checkbox_legs,
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+
text_legs,
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+
)
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app/validation_submission/utils_individual.py
CHANGED
@@ -1,7 +1,6 @@
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import random
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import string
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import hashlib
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-
import gradio as gr
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def generate_random_md5():
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# Generate a random string
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@@ -14,7 +13,5 @@ def add_data_to_individual(key, value, individual):
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individual[key] = value
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return individual
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-
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-
individual = {}
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-
return individual
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import random
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import string
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import hashlib
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def generate_random_md5():
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# Generate a random string
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individual[key] = value
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return individual
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+
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app/validation_submission/validation.py
CHANGED
@@ -15,6 +15,8 @@ from validation_submission.processing import (
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process_physical,
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process_followup,
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)
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from dotenv import load_dotenv
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import os
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@@ -43,6 +45,7 @@ def validate_individual(data, error_icon, error_box, mode: str):
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error_icon, error_box = reset_error_box(error_icon, error_box)
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# data = get_json_one_individual() # TODO: This should change
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data["identifier"] = str(uuid.uuid4())
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img, geolocalisation, specie, number, comments = field_checker(data)
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error_behavior = None
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@@ -80,8 +83,6 @@ def validate_individual(data, error_icon, error_box, mode: str):
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dead_state=data["dead_state"],
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)
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except ValidationError as e:
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-
print("Error in wounded_state:")
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-
print(e.json())
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error_individual = e
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elif data["dead_state"] == "Yes":
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@@ -103,8 +104,6 @@ def validate_individual(data, error_icon, error_box, mode: str):
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),
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)
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except ValidationError as e:
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106 |
-
print("Error in dead_state:")
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-
print(e.json())
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error_individual = e
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else:
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try:
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@@ -120,7 +119,6 @@ def validate_individual(data, error_icon, error_box, mode: str):
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dead_state=data["dead_state"],
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)
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except ValidationError as e:
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-
print(f"""Error in individual else: {e}""")
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error_individual = e
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if (
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error_behavior
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@@ -184,12 +182,6 @@ def show_error(
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return error_box
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|
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-
def reset_error_box(error_icon, error_box):
|
188 |
-
error_icon = gr.Image(PATH_ICONS+"supprimer.png", height=80, width=80, visible=False)
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189 |
-
error_box = gr.Text(value=None, visible=False)
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190 |
-
return error_icon, error_box
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191 |
-
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192 |
-
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193 |
#### VALIDATION FUNCTIONS
|
194 |
def validate_circumstance(data):
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circumstance_raw = get_fields(data, "circumstance")
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@@ -200,7 +192,6 @@ def validate_circumstance(data):
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error = None
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except ValidationError as e:
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error = e
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203 |
-
print(f"""Error in Validate_circumstance: {e}""")
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circumstances = None
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return circumstances, error
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@@ -217,7 +208,6 @@ def validate_behavior(data, mode):
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behavior = Behaviors(**behaviors_formatted)
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error = None
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except ValidationError as e:
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220 |
-
print(f"""Error in behaviors validation: {e}""")
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behavior = None
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error = e
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return behavior, error
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@@ -226,7 +216,6 @@ def validate_behavior(data, mode):
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def validate_physical(data, mode):
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physical_raw = get_fields(data, "physical")
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physical_formatted = process_physical(physical_raw)
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229 |
-
# print(physical_formatted)
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try:
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231 |
if mode == "simple":
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PhysicalAnomaliesSimple.model_validate(physical_formatted)
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@@ -236,7 +225,6 @@ def validate_physical(data, mode):
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physical = PhysicalAnomalies(**physical_formatted)
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error = None
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238 |
except ValidationError as e:
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239 |
-
print(f"""Error in physical_anomalies validation: {e}""")
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240 |
physical = None
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241 |
error = e
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242 |
return physical, error
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@@ -250,7 +238,5 @@ def validate_follow_up(data):
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followup = FollowUpEvents(**followup_formatted)
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251 |
error = None
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252 |
except ValidationError as e:
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253 |
-
print(f"""Error in follow-up events validation: {e}""")
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254 |
-
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255 |
followup = None
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256 |
return followup, error
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15 |
process_physical,
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16 |
process_followup,
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)
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18 |
+
from validation_submission.utils_individual import generate_random_md5
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19 |
+
from validation_submission.resets import reset_error_box
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20 |
|
21 |
from dotenv import load_dotenv
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22 |
import os
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|
45 |
error_icon, error_box = reset_error_box(error_icon, error_box)
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46 |
# data = get_json_one_individual() # TODO: This should change
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47 |
data["identifier"] = str(uuid.uuid4())
|
48 |
+
data["image_md5"] = generate_random_md5()
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49 |
img, geolocalisation, specie, number, comments = field_checker(data)
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50 |
|
51 |
error_behavior = None
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83 |
dead_state=data["dead_state"],
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84 |
)
|
85 |
except ValidationError as e:
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86 |
error_individual = e
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87 |
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88 |
elif data["dead_state"] == "Yes":
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),
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)
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106 |
except ValidationError as e:
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107 |
error_individual = e
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108 |
else:
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109 |
try:
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119 |
dead_state=data["dead_state"],
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)
|
121 |
except ValidationError as e:
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122 |
error_individual = e
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123 |
if (
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error_behavior
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182 |
return error_box
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183 |
|
184 |
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185 |
#### VALIDATION FUNCTIONS
|
186 |
def validate_circumstance(data):
|
187 |
circumstance_raw = get_fields(data, "circumstance")
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|
192 |
error = None
|
193 |
except ValidationError as e:
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194 |
error = e
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195 |
circumstances = None
|
196 |
return circumstances, error
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197 |
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208 |
behavior = Behaviors(**behaviors_formatted)
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209 |
error = None
|
210 |
except ValidationError as e:
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|
211 |
behavior = None
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212 |
error = e
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213 |
return behavior, error
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|
216 |
def validate_physical(data, mode):
|
217 |
physical_raw = get_fields(data, "physical")
|
218 |
physical_formatted = process_physical(physical_raw)
|
|
|
219 |
try:
|
220 |
if mode == "simple":
|
221 |
PhysicalAnomaliesSimple.model_validate(physical_formatted)
|
|
|
225 |
physical = PhysicalAnomalies(**physical_formatted)
|
226 |
error = None
|
227 |
except ValidationError as e:
|
|
|
228 |
physical = None
|
229 |
error = e
|
230 |
return physical, error
|
|
|
238 |
followup = FollowUpEvents(**followup_formatted)
|
239 |
error = None
|
240 |
except ValidationError as e:
|
|
|
|
|
241 |
followup = None
|
242 |
return followup, error
|
test.py
DELETED
@@ -1,10 +0,0 @@
|
|
1 |
-
# app.py
|
2 |
-
import gradio as gr
|
3 |
-
|
4 |
-
def greet(name):
|
5 |
-
return f"Hello, {name}!"
|
6 |
-
|
7 |
-
demo = gr.Interface(fn=greet, inputs="text", outputs="text")
|
8 |
-
|
9 |
-
if __name__ == "__main__":
|
10 |
-
demo.launch()
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|