Update app.py

app.py

@@ -390,6 +390,10 @@ def annotate(df, args, pipeInner, tokenizerGliner, modelGliner, modelGlinerBio,
                 # Filter the dataframe to keep only rows where the score is greater than 3.0
                 df_max_score_biop = df_max_score_biop[df_max_score_biop['score'] > 3.0]
 
+                if "semantic_groups" not in df_max_score_biop.columns:
+                    # Drop the '@id' column
+                    df_max_score_biop["semantic_groups"] = None 
+                    
                 # Specify the columns you want to keep
                 columns_to_keep = ["score", "from", "to", "prefLabel", "text", "semantic_groups", "@id", "ALLURIScontextFromNCBO"]