Healthcare
Collection
4 items
•
Updated
unsloth/Meta-Llama-3.1-8B-Instruct-bnb-4bit
4096
Function calling
max_seq_length = 4096
dtype = None
load_in_4bit = True # Use 4bit quantization to reduce memory usage.
alpaca_prompt = """Below is an instruction that describes a task, paired with an input that provides further context. Write a response that appropriately completes the request.
### Instruction:
{}
### Input:
{}
### Response:
{}"""
from unsloth import FastLanguageModel
model, tokenizer = FastLanguageModel.from_pretrained(
model_name = "Svngoku/Llama-3.1-8B-AlpaCare-MedInstruct",
max_seq_length = max_seq_length,
dtype = dtype,
load_in_4bit = load_in_4bit,
)
FastLanguageModel.for_inference(model)
def generate_medical_answer(input: str = "", instruction: str = ""):
inputs = tokenizer(
[
alpaca_prompt.format(
instruction,
input,
"",
)
], return_tensors = "pt").to("cuda")
text_streamer = TextStreamer(tokenizer)
# _ = model.generate(**inputs, streamer = text_streamer, max_new_tokens = 800)
# Generate the response
output = model.generate(**inputs, max_new_tokens=1024)
# Decode the generated response
generated_text = tokenizer.decode(output[0], skip_special_tokens=True)
# Extract the response part if needed (assuming the response starts after "### Response:")
response_start = generated_text.find("### Response:") + len("### Response:")
response = generated_text[response_start:].strip()
# Format the response in Markdown
# markdown_response = f"{response}"
# Render the markdown response
# display(Markdown(markdown_response))
return response
generate_medical_answer(
instruction = "What are the pharmacodynamics of Omeprazole?",
input="Writte the text in plain markdown."
)
The model have been evaluated with gpt-4o-mini
with DeepEval
.
The prompt used is quite strict. This reassures us as to the robustness of the model and its ability to adapt to the new fine-tuned datas.
Answer Relevancy | Correctness (GEval) | Bias | Toxicity | Test Result | % of Passing Tests | |
---|---|---|---|---|---|---|
Dataset 1 | 0.89 | 0.8 | 0 | 0 | 22 / 28 tests | 78.57 |
Dataset 2 | 0.85 | 0.83 | 0 | 0 | 8 / 20 tests | 40 |
lavita/MedQuAD | 0.95 | 0.81 | 0 | 0 | 14 / 20 tests | 70 |
def evaluate_llama_alpacare_gpt4(medQA):
# Define the metrics
answer_relevancy_metric = AnswerRelevancyMetric(
threshold=0.7,
model="gpt-4o-mini",
include_reason=True
)
bias = BiasMetric(
model="gpt-4o-mini",
include_reason=True,
threshold=0.8
)
toxicity = ToxicityMetric(
model="gpt-4o-mini",
include_reason=True
)
correctness_metric = GEval(
name="Correctness",
threshold=0.7,
model="gpt-4o-mini",
criteria="Determine whether the actual output is factually correct based on the expected output, focusing on medical accuracy and adherence to established guidelines.",
evaluation_steps=[
"Check whether the facts in 'actual output' contradict any facts in 'expected output' or established medical guidelines.",
"Penalizes the omission of medical details, depending on their criticality and especially those that could have an impact on the care provided to the patient or on his or her understanding.",
"Ensure that medical terminology and language used are precise and appropriate for medical context.",
"Assess whether the response adequately addresses the specific medical question posed.",
"Vague language or contradicting opinions are acceptable in general contexts, but factual inaccuracies, especially regarding medical data or guidelines, are not."
],
evaluation_params=[LLMTestCaseParams.INPUT, LLMTestCaseParams.ACTUAL_OUTPUT]
)
test_cases = []
# metric = FaithfulnessMetric(
# model="gpt-4o-mini",
# include_reason=True
# )
# Loop through the dataset and evaluate
for example in medQA:
question = example['Question']
expected_output = example['Answer']
question_focus = example['instruction']
# Generate the actual output
actual_output = generate_medical_answer(
instruction=question,
input=question_focus,
)
# Define the test case
test_case = LLMTestCase(
input=question,
actual_output=actual_output,
expected_output=expected_output,
)
test_cases.append(test_case)
evaluate(test_cases, [answer_relevancy_metric, correctness_metric, bias, toxicity])
This llama model was trained 2x faster with Unsloth and Huggingface's TRL library.
Base model
unsloth/Meta-Llama-3.1-8B