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The dataset generation failed because of a cast error
Error code: DatasetGenerationCastError Exception: DatasetGenerationCastError Message: An error occurred while generating the dataset All the data files must have the same columns, but at some point there are 1 new columns ({'Most'}) and 1 missing columns ({'Background'}). This happened while the csv dataset builder was generating data using hf://datasets/wzkariampuzha/EpiExtract4GARD/val.tsv (at revision e5fc49d2b3bf3085f0d654902e1d19f1b1afdda7) Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations) Traceback: Traceback (most recent call last): File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2011, in _prepare_split_single writer.write_table(table) File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 585, in write_table pa_table = table_cast(pa_table, self._schema) File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2302, in table_cast return cast_table_to_schema(table, schema) File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2256, in cast_table_to_schema raise CastError( datasets.table.CastError: Couldn't cast Most: string O: string -- schema metadata -- pandas: '{"index_columns": [{"kind": "range", "name": null, "start": 0, "' + 473 to {'Background': Value(dtype='string', id=None), 'O': Value(dtype='string', id=None)} because column names don't match During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1321, in compute_config_parquet_and_info_response parquet_operations = convert_to_parquet(builder) File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 935, in convert_to_parquet builder.download_and_prepare( File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1027, in download_and_prepare self._download_and_prepare( File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1122, in _download_and_prepare self._prepare_split(split_generator, **prepare_split_kwargs) File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1882, in _prepare_split for job_id, done, content in self._prepare_split_single( File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 2013, in _prepare_split_single raise DatasetGenerationCastError.from_cast_error( datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset All the data files must have the same columns, but at some point there are 1 new columns ({'Most'}) and 1 missing columns ({'Background'}). This happened while the csv dataset builder was generating data using hf://datasets/wzkariampuzha/EpiExtract4GARD/val.tsv (at revision e5fc49d2b3bf3085f0d654902e1d19f1b1afdda7) Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
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Background
string | O
string |
---|---|
Chemotherapy | O |
- | O |
induced | O |
cardiomyopathy | O |
( | O |
CICM | O |
) | O |
and | O |
heart | O |
failure | O |
are | O |
major | O |
complications | O |
of | O |
cancer | O |
therapeutics | O |
and | O |
can | O |
result | O |
in | O |
significant | O |
morbidity | O |
and | O |
mortality | O |
. | O |
There | O |
is | O |
limited | O |
data | O |
on | O |
the | O |
incidence | B-EPI |
and | O |
risk | O |
factors | O |
of | O |
CICM | O |
in | O |
African | O |
American | O |
and | O |
Afro | O |
- | O |
Caribbean | O |
patients | O |
. | O |
Methods | O |
We | O |
performed | O |
a | O |
retrospective | O |
chart | O |
review | O |
to | O |
evaluate | O |
the | O |
baseline | O |
characteristics | O |
that | O |
may | O |
predispose | O |
to | O |
CICM | O |
. | O |
Patients | O |
were | O |
African | O |
American | O |
and | O |
Afro | O |
- | O |
Caribbean | O |
ethnicity | O |
. | O |
Data | O |
was | O |
collected | O |
between | O |
2014 | O |
to | O |
2018 | O |
. | O |
Patients | O |
had | O |
transthoracic | O |
echocardiogram | O |
( | O |
TTE | O |
) | O |
or | O |
multigated | O |
acquisition | O |
scan | O |
( | O |
MUGA | O |
) | O |
prior | O |
to | O |
cancer | O |
therapy | O |
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